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Saturday, June 30
preprocessing, rendering, segmentation
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Sunday, July 1
feature extraction measurement
|
Monday, July 2
time series, model based presentation
|
8:30 |
Introdution
(Felix)
introduction to tools and faculty
photometry
deconvolution process
resampling & manipulation
software setup
|
Lecture "filters" (PC)
Frequency filter, spatial filters
image regularization
conserving object properties
|
Main video lecture (Badri)
analyzing multi-dimensional images of cells and tissue
|
9:30 |
|
Coffee and discussion |
Coffee and discussion |
10:00 |
Bitplane Lab (Kaethe)
the Imaris system
|
NIH Image Lab (Felix & Glen)
image
|
Lab “localization" (Justin)
feature extraction/
selection
classification
relevance feedback
|
10:40 |
Lab “rendering” (Felix & Kaethe)
display tools
work on canned data
|
Vendor Lab "classification"
demonstration of the quantitative tools
|
Vendor Lab “feature tracking & series"
demonstration of the quantitatife tools (Arvonn & Kaethe)
|
11:20 |
Lecture 3D rendering (Felix)
volumes, surfacesselection of tools
prerequisites for rendering
|
Vendor Lab (Glen)
Measurements in Slidebook
|
Lecture (Justin)
comparison
classification
|
12.00 |
LUNCH | >
LUNCH |
LUNCH |
13.00 |
Vendor Lab “deconvolution" (Arvonn) |
Lecture "presenting the data" (Glen)
useful techniques
controlling image noise and image sharpness
|
Lecture movies and slides (Felix)
how presentation software performs
|
13:45 |
Lab “deconvolution” filtering and thresholds
prerequisites
object based models
tools
|
Lab “measurement” (Justin)
Measurements on complex data
|
Conclusion and presentation (PC)
students shall present some of their solutions
|
15:00 |
Tea and discussion |
Tea and discussion |
Tea and discussion |
15:30 |
Lab “Cell Segmentation”
(Justin & Felix & Arvonn)
Seeding
Voronoi
Seeded Watershed
Level Set Methods
Graphical Model Methods
|
Main video lecture (Robert)
comparison
classification
clustering
Lab "image understanding " (Justin)
Topology & geometry
accuracy
|
Process your samples (Felix, Glen, PC)
use infrastructure and faculty for issues with your course data
|
Farewell (17:00) (Felix)
exchange of contacts and addresses
DVD-ROM distribution (at night in Gage)
|
18.00 |
DINNER |
DINNER |
DINNER |
19.00 |
Vendor Lab “deconvolution” (Felix & Glen)
canned data examples on SlideBook and Huygens
|
Lab printing and publishing (Felix & Glen & Kaethe)
efficient use of tools
what can be printed
doing animations right
|
19:30 |
Presentation of some results
how did you solve today’s problems?(Felix & Glen)
work on student data (PC)
student work on their data
|
Presentation of some results "solving today's problems" (PC & Felix)
work on student data (Felix)
student create their projects
|
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